Clean installation missing it's /wp-content folder

I installed WordPress 4.1 on my server. All files are installed, and I can login correctly without errors. But if I login through FTP I can't find the wp-content folder. If I do the above on my server panel through the file browser I can see the wp-content folder correctly.

For some reason it is hidden when browsing through the FTP client. I tried FileZilla but also other FTP clients. All of them do not show the wp-content folder.

I tried to change the folder permissions, but no effect.

Anyone knows how to fix this, or what the cause of it might be? Thank you.